Struct google_api_proto::google::genomics::v1::ReadGroupSet

pub struct ReadGroupSet {
    pub id: String,
    pub dataset_id: String,
    pub reference_set_id: String,
    pub name: String,
    pub filename: String,
    pub read_groups: Vec<ReadGroup>,
    pub info: BTreeMap<String, ListValue>,
}

A read group set is a logical collection of read groups, which are collections of reads produced by a sequencer. A read group set typically models reads corresponding to one sample, sequenced one way, and aligned one way.

• A read group set belongs to one dataset.
• A read group belongs to one read group set.
• A read belongs to one read group.

For more genomics resource definitions, see Fundamentals of Google Genomics

Fields

id: String

The server-generated read group set ID, unique for all read group sets.

dataset_id: String

The dataset to which this read group set belongs.

reference_set_id: String

The reference set to which the reads in this read group set are aligned.

name: String

The read group set name. By default this will be initialized to the sample name of the sequenced data contained in this set.

filename: String

The filename of the original source file for this read group set, if any.

read_groups: Vec<ReadGroup>

The read groups in this set. There are typically 1-10 read groups in a read group set.

info: BTreeMap<String, ListValue>

A map of additional read group set information.

Trait Implementations

impl Clone for ReadGroupSet

fn clone(&self) -> ReadGroupSet

Returns a copy of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for ReadGroupSet

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Default for ReadGroupSet

fn default() -> Self

Returns the “default value” for a type.

impl Message for ReadGroupSet

fn encoded_len(&self) -> usize

Returns the encoded length of the message without a length delimiter.

fn clear(&mut self)

Clears the message, resetting all fields to their default.

fn encode(&self, buf: &mut impl BufMut) -> Result<(), EncodeError>

where Self: Sized,

Encodes the message to a buffer.

fn encode_to_vec(&self) -> Vec<u8>

where Self: Sized,

Encodes the message to a newly allocated buffer.

fn encode_length_delimited( &self, buf: &mut impl BufMut, ) -> Result<(), EncodeError>

where Self: Sized,

Encodes the message with a length-delimiter to a buffer.

fn encode_length_delimited_to_vec(&self) -> Vec<u8>

where Self: Sized,

Encodes the message with a length-delimiter to a newly allocated buffer.

fn decode(buf: impl Buf) -> Result<Self, DecodeError>

where Self: Default,

Decodes an instance of the message from a buffer.

fn decode_length_delimited(buf: impl Buf) -> Result<Self, DecodeError>

where Self: Default,

Decodes a length-delimited instance of the message from the buffer.

fn merge(&mut self, buf: impl Buf) -> Result<(), DecodeError>

where Self: Sized,

Decodes an instance of the message from a buffer, and merges it into self.

fn merge_length_delimited(&mut self, buf: impl Buf) -> Result<(), DecodeError>

where Self: Sized,

Decodes a length-delimited instance of the message from buffer, and merges it into self.

impl PartialEq for ReadGroupSet

fn eq(&self, other: &ReadGroupSet) -> bool

This method tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Rhs) -> bool

This method tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

impl StructuralPartialEq for ReadGroupSet