Struct google_api_proto::google::genomics::v1::VariantSet

pub struct VariantSet {
    pub dataset_id: String,
    pub id: String,
    pub reference_set_id: String,
    pub reference_bounds: Vec<ReferenceBound>,
    pub metadata: Vec<VariantSetMetadata>,
    pub name: String,
    pub description: String,
}

A variant set is a collection of call sets and variants. It contains summary statistics of those contents. A variant set belongs to a dataset.

For more genomics resource definitions, see Fundamentals of Google Genomics

Fields

dataset_id: String

The dataset to which this variant set belongs.

id: String

The server-generated variant set ID, unique across all variant sets.

reference_set_id: String

The reference set to which the variant set is mapped. The reference set describes the alignment provenance of the variant set, while the referenceBounds describe the shape of the actual variant data. The reference set’s reference names are a superset of those found in the referenceBounds.

For example, given a variant set that is mapped to the GRCh38 reference set and contains a single variant on reference ‘X’, referenceBounds would contain only an entry for ‘X’, while the associated reference set enumerates all possible references: ‘1’, ‘2’, ‘X’, ‘Y’, ‘MT’, etc.

reference_bounds: Vec<ReferenceBound>

A list of all references used by the variants in a variant set with associated coordinate upper bounds for each one.

metadata: Vec<VariantSetMetadata>

The metadata associated with this variant set.

name: String

User-specified, mutable name.

description: String

A textual description of this variant set.

Trait Implementations

impl Clone for VariantSet

fn clone(&self) -> VariantSet

Returns a copy of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for VariantSet

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Default for VariantSet

fn default() -> Self

Returns the “default value” for a type.

impl Message for VariantSet

fn encoded_len(&self) -> usize

Returns the encoded length of the message without a length delimiter.

fn clear(&mut self)

Clears the message, resetting all fields to their default.

fn encode(&self, buf: &mut impl BufMut) -> Result<(), EncodeError>

where Self: Sized,

Encodes the message to a buffer.

fn encode_to_vec(&self) -> Vec<u8>

where Self: Sized,

Encodes the message to a newly allocated buffer.

fn encode_length_delimited( &self, buf: &mut impl BufMut, ) -> Result<(), EncodeError>

where Self: Sized,

Encodes the message with a length-delimiter to a buffer.

fn encode_length_delimited_to_vec(&self) -> Vec<u8>

where Self: Sized,

Encodes the message with a length-delimiter to a newly allocated buffer.

fn decode(buf: impl Buf) -> Result<Self, DecodeError>

where Self: Default,

Decodes an instance of the message from a buffer.

fn decode_length_delimited(buf: impl Buf) -> Result<Self, DecodeError>

where Self: Default,

Decodes a length-delimited instance of the message from the buffer.

fn merge(&mut self, buf: impl Buf) -> Result<(), DecodeError>

where Self: Sized,

Decodes an instance of the message from a buffer, and merges it into self.

fn merge_length_delimited(&mut self, buf: impl Buf) -> Result<(), DecodeError>

where Self: Sized,

Decodes a length-delimited instance of the message from buffer, and merges it into self.

impl PartialEq for VariantSet

fn eq(&self, other: &VariantSet) -> bool

This method tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Rhs) -> bool

This method tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

impl StructuralPartialEq for VariantSet