Struct google_api_proto::google::genomics::v1::ImportVariantsRequest

pub struct ImportVariantsRequest {
    pub variant_set_id: String,
    pub source_uris: Vec<String>,
    pub format: i32,
    pub normalize_reference_names: bool,
    pub info_merge_config: BTreeMap<String, i32>,
}

The variant data import request.

Fields

variant_set_id: String

Required. The variant set to which variant data should be imported.

source_uris: Vec<String>

A list of URIs referencing variant files in Google Cloud Storage. URIs can include wildcards as described here. Note that recursive wildcards (‘**’) are not supported.

format: i32

The format of the variant data being imported. If unspecified, defaults to to VCF.

normalize_reference_names: bool

Convert reference names to the canonical representation. hg19 haploytypes (those reference names containing “_hap”) are not modified in any way. All other reference names are modified according to the following rules: The reference name is capitalized. The “chr” prefix is dropped for all autosomes and sex chromsomes. For example “chr17” becomes “17” and “chrX” becomes “X”. All mitochondrial chromosomes (“chrM”, “chrMT”, etc) become “MT”.

info_merge_config: BTreeMap<String, i32>

A mapping between info field keys and the InfoMergeOperations to be performed on them. This is plumbed down to the MergeVariantRequests generated by the resulting import job.

Implementations

impl ImportVariantsRequest

pub fn format(&self) -> Format

Returns the enum value of format, or the default if the field is set to an invalid enum value.

pub fn set_format(&mut self, value: Format)

Sets format to the provided enum value.

pub fn get_info_merge_config(&self, key: &str) -> Option<InfoMergeOperation>

Returns the enum value for the corresponding key in info_merge_config, or None if the entry does not exist or it is not a valid enum value.

pub fn insert_info_merge_config( &mut self, key: String, value: InfoMergeOperation, ) -> Option<InfoMergeOperation>

Inserts a key value pair into info_merge_config.

Trait Implementations

impl Clone for ImportVariantsRequest

fn clone(&self) -> ImportVariantsRequest

Returns a copy of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for ImportVariantsRequest

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Default for ImportVariantsRequest

fn default() -> Self

Returns the “default value” for a type.

impl Message for ImportVariantsRequest

fn encoded_len(&self) -> usize

Returns the encoded length of the message without a length delimiter.

fn clear(&mut self)

Clears the message, resetting all fields to their default.

fn encode(&self, buf: &mut impl BufMut) -> Result<(), EncodeError>

where Self: Sized,

Encodes the message to a buffer.

fn encode_to_vec(&self) -> Vec<u8>

where Self: Sized,

Encodes the message to a newly allocated buffer.

fn encode_length_delimited( &self, buf: &mut impl BufMut, ) -> Result<(), EncodeError>

where Self: Sized,

Encodes the message with a length-delimiter to a buffer.

fn encode_length_delimited_to_vec(&self) -> Vec<u8>

where Self: Sized,

Encodes the message with a length-delimiter to a newly allocated buffer.

fn decode(buf: impl Buf) -> Result<Self, DecodeError>

where Self: Default,

Decodes an instance of the message from a buffer.

fn decode_length_delimited(buf: impl Buf) -> Result<Self, DecodeError>

where Self: Default,

Decodes a length-delimited instance of the message from the buffer.

fn merge(&mut self, buf: impl Buf) -> Result<(), DecodeError>

where Self: Sized,

Decodes an instance of the message from a buffer, and merges it into self.

fn merge_length_delimited(&mut self, buf: impl Buf) -> Result<(), DecodeError>

where Self: Sized,

Decodes a length-delimited instance of the message from buffer, and merges it into self.

impl PartialEq for ImportVariantsRequest

fn eq(&self, other: &ImportVariantsRequest) -> bool

This method tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Rhs) -> bool

This method tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

impl StructuralPartialEq for ImportVariantsRequest